Index

B

balanced_sampling() (screcode.RECODE method), [1]

C

check_applicability() (screcode.RECODE method), [1]

cv_ (screcode.RECODE attribute), [1]

F

fit() (screcode.RECODE method), [1] (screcode.RECODE_core method), [1]

fit_transform() (screcode.RECODE method), [1] (screcode.RECODE_core method), [1] fit_transform_integration() (screcode.RECODE method), [1]

H

highly_variable_genes() (screcode.RECODE method), [1]

I

iRECODEInapplicableError, [1]

L

log_ (screcode.RECODE attribute), [1]

lognormalize() (screcode.RECODE method), [1]

M

module screcode, [1], [2], [3]

N

noise_variance_ (screcode.RECODE attribute), [1]

normalized_variance_ (screcode.RECODE attribute), [1]

P

plot_ATAC_preprocessing() (screcode.RECODE method), [1] plot_denoised_data() (screcode.RECODE method), [1] plot_mean_cv() (screcode.RECODE method), [1] plot_mean_variance() (screcode.RECODE method), [1]

plot_normalized_data() (screcode.RECODE method), [1] plot_original_data() (screcode.RECODE method), [1] plot_procedures() (screcode.RECODE method), [1] plot_projected_data() (screcode.RECODE method), [1] plot_variance_modified_data() (screcode.RECODE method), [1]

R

RECODE (class in screcode), [1]

RECODE_core (class in screcode), [1] report() (screcode.RECODE method), [1]

S

screcode module, [1], [2], [3]

significance_ (screcode.RECODE attribute), [1] sRECODEInapplicableError, [1]

T

transform() (screcode.RECODE method), [1] (screcode.RECODE_core method), [1]

transform_integration() (screcode.RECODE method), [1]